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Publications


  1. Orger MB, de Polavieja GG (2017) Zebrafish Behavior: Opportunities and Challenges Annu. Rev. Neurosci. (doi:10.1146/annurev-neuro-071714-033857)


    Lu R, Sun W, Liang Y, Kerlin A, Bierfeld J, Seelig JD, Wilson DE, Scholl B, Mohar B, Tanimoto M, Koyama M, Fitzpatrick D, Orger MB, Ji N (2017) Video-rate volumetric functional imaging of the brain at synaptic resolution Nat. Neurosci. 20 (4), 620-628. (doi:10.1038/nn.4516)


    Orger MB, Portugues R. (2016) Correlating Whole Brain Neural Activity with Behavior in Head-Fixed Larval Zebrafish. Methods Mol Biol 1451 , 307-320 (doi:10.1007/978-1-4939-3771-4_21)


    Orger MB. (2016) The Cellular Organization of Zebrafish Visuomotor Circuits Curr. Biol. 26 (9), R377-R385 (doi:10.1016/j.cub.2016.03.054)


    Feierstein Claudia E, Portugues Ruben, Orger Michael B. (2015) Seeing the whole picture: A comprehensive imaging approach to functional mapping of circuits in behaving zebrafish Neuroscience 296 , 26-38


    Severi KE, Portugues R, Marques JC, O'Malley DM, Orger MB, Engert F. (2014) Neural Control and Modulation of Swimming Speed in the Larval Zebrafish Neuron 83 (2), 00578-9 (doi:10.1016/j.neuron.2014.06.032)


    Portugues R, Feierstein CE, Engert F, Orger MB (2014) Whole-Brain Activity Maps Reveal Stereotyped, Distributed Networks for Visuomotor Behavior Neuron 81 (6), 1328-1343 (doi:10.1016/j.neuron.2014.01.019)


    Tsai-Wen Chen, Trevor J. Wardill, Yi Sun, Stefan R. Pulver, Sabine L. Renninger, Amy Baohan, Eric R. Schreiter, Rex A. Kerr, Michael B. Orger, Vivek Jayaraman, Loren L. Looger, Karel Svoboda & Douglas S. Kim (2013) Ultrasensitive fluorescent proteins for imaging neuronal activity Nature (499), 295–300 (doi:10.1038/nature12354)


    Renninger SL, Orger MB. (2013) Two-photon imaging of neural population activity in zebrafish. Methods S1046-2023 (13), 00166-7 (doi:10.1016/j.ymeth.2013.05.016)


    Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li & Philipp J Keller (2013) Whole-brain functional imaging at cellular resolution using light-sheet microscopy Nat. Methods (doi:10.1038/nmeth.2434)


    Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B. Orger, Kristen E. Severi, John J. Macklin, Ronak Patel, Stefan R. Pulver, Trevor J. Wardill, Elisabeth Fisch (2013) Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front. Mol. Neurosci. (doi:10.3389/fnmol.2013.00002)


    Marvin JS, Borghuis BG, Tian L, Cichon J, Harnett MT, Akerboom J, Gordus A, Renninger SL, Chen TW, Bargmann CI, Orger MB, Schreiter ER, Demb JB, Gan WB, Hires SA, Looger LL. (2013) An optimized fluorescent probe for visualizing glutamate neurotransmission. Nat. Methods (doi:10.1038/nmeth.2333)


    Akerboom J, Mutlu S, Orger MB et al Looger LL. (2012) Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging. J. Neurosci. 32 (40), 13819-13840 (doi:10.1523/?JNEUROSCI.2601-12.2012 )


    Bianco IH, Ma LH, Schoppik D, Robson DN, Orger MB, Beck JC, Li JM, Schier AF, Engert F, Baker R (2012) The Tangential Nucleus Controls a Gravito-inertial Vestibulo-ocular Reflex Curr. Biol. (doi:10.1016/j.cub.2012.05.026)


    Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R. (2012) Brain-wide neuronal dynamics during motor adaptation in zebrafish. Nature 485 (7399), 471-7 (doi:10.1038/nature11057)


    Orger MB, Kampff AR, Severi KE, Bollmann JH, Engert F (2008) Control of visual behavior by distinct populations of spinal projection neurons. Nat. Neurosci. 11 (3), 327-333 (doi:10.1038/nn2048)


    Smear MC, Tao HW, Staub W, Orger MB, Gosse NJ, Liu Y, Takahashi K, Poo MM, Baier H (2007) Vesicular glutamate transport at a central synapse limits the acuity of visual perception in zebrafish. Neuron 53 (1), 65-77 (doi:10.1016/j.neuron.2006.12.013)


    Muto A, Orger MB, Wehman A, Smear MC, Kay JN, Page-McCaw P, Gahtan E, Xiao T, Nevin LM, Gosse NJ, Staub W, Finger-Baier K, Baier H (2005) Forward genetic analysis of visual behaviors in zebrafish. PLoS Genet. 1 (5), e66 (doi:10.1371/journal.pgen.0010066)


    Orger MB & Baier H (2005) Channeling of red and green cone inputs to the zebrafish optomotor response. Vis. Neurosci. 22 (3), 275-81 (doi:10.1017/S0952523805223039)


    Orger MB, Gahtan E, Muto A, Page-McCaw P, Smear MC, Baier H (2004) Behavioral screening assays in zebrafish. Methods Cell Biol. 77 , 53-68


    Orger MB, Smear MC, Anstis SM, Baier H (2000) Perception of Fourier and non-Fourier motion by larval zebrafish. Nat. Neurosci. 3 (11), 1128-1133 (doi:10.1038/80649)

Key publications